[dbSNP] Merged SNPs archive


dbSNP ではバージョンアップの際にrs numberの融合が頻繁に起きており、古いSNP numberが最新版では消えているという悲しい現象がある。

今回、rs number融合の歴史(アーカイブ)をやっと見つけたので、紹介する。

[Offical Information]

The dbSNP Mapping Process - SNP FAQ Archive - NCBI Bookshelf

Can’t you inform users when refSNP numbers have changed?


[Stats]
最新のdbSNP137に至るまでの、バージョンアップ時のSNP融合数を示す。
Number of merged RefSNPs.

dbSNP version
RefSNP cluster    (rs#'s)
RefSNP cluster    (validated)
Number of
merged RefSNPs
Genome
Build
Date available
125
10,430,753
4,868,126
-
GRCh35.1
2005/9/29
126
11,961,761
5,646,244
618,073
hg18?
2006/5/18
127
11,811,594
5,689,286
324,938
hg18?
2007/3/8
128
11,883,685
6,262,709
48,912
hg18?
2007/10/25
129
14,708,752
6,573,789
1,823
hg18?
2008/4/14
130
17,804,034
6,573,584
4,639,885
GRCh36.3/hg18
2009/4/30
131
23,653,737
14,653,228
194,771
GRCh37.1/hg19
2010/3/25
132
30,442,771
19,727,605
224,198
GRCh37.1/hg19
2010/9/23
133
-
-
10,964
-
2011/1/31
134
41,365,915
6,961,883
1,632
GRCh37.2/hg19
2011/8/8
135
52,327,221
41,740,143
616,973
GRCh37.3/hg19
2011/10/13
136
-
-
63,345
-
to be determined
137
53,558,214
38,077,993
1,494,661
GRCh37.3/hg19
2012/6/26

[Links]
- The Current State of dbSNP
Share on Google Plus

About Piyoko

    Blogger Comment
    Facebook Comment

1 コメント:

  1. How To Make Money On Sports Betting
    Online sports kadangpintar betting is available for a whole host of US and European https://septcasino.com/review/merit-casino/ sports betting herzamanindir.com/ markets. Some US states, like Louisiana and New Jersey, apr casino allow หารายได้เสริม

    返信削除